About Textpresso Categories/Ontology Copyright Downloads Feedback Home Query Language Search User Guide
Enter keyword(s) and/or category/ies. Selecting categories for a query makes a search more specific. For example, you can retrieve sentences that contain the word HSN and a Oryza sativa gene name by typing the keyword 'SPW1' and choosing the category 'gene (Oryza sativa)'. A category hit occurs when a particular word or phrase in the sentence is defined as a member of a particular category. Categories will be concatenated by a Boolean 'and' operation to other categories and keyword(s) if present. To search for terms in categories, click on the Categories/Ontology link above.
Keywords
Separate multiple, required keywords by white spaces (Boolean 'and').
Separate multiple, alternative keywords by a comma with no white spaces (Boolean 'or').
Enter phrases in double quotes, and put a '-' sign in front of words which are to be excluded.
Keyword Specification
AND/OR
Categories
Fields
Search Scope
Search Mode
Sort by
 
Narrow your search results with filter:
Put a '+' sign in front of words which have to be included, a '-' sign in front of words which have to be excluded. Enter the field of the word, viz author, title, year, journal, abstract, type or sentence in square brackets. Enter phrases in double quotes.
For example, to find all the papers in the search result that have Jack as author, but not John, enter +Jack-John[author]. To exclude all papers that have the phrase double mutant in title, enter -"double mutant"[title]. You can combine several filters and enter something like +Jack-John[author] -"double mutant"[title] +1994[year] -review[type].
Click on Filter! button to activate the filter.

Goto:
of 1
Display options:
author: on | off accession: on | off type: on | off abstract: on | off title: on | off
citation: on | off journal: on | off year: on | off supplementals: on | off textlinks: on | off
searchterm-highlighting: on | off matching sentences: none 1 5 10 entries/page: 5 10 20 50
4 matches found in 2 documents. Search time: 0.085 seconds.
Global links/files: all results in endnote all results in print version
Score: 3.00
Title: Epidermal cell death in rice is confined to cells with a distinct molecular identity and is mediated by ethylene and H2O2 through an autoamplified signal pathway .
Author: Steffens B Sauter M
Journal: Plant Cell Citation: V : 21 P : 184-96 Year: 2009 Type: MEDLINE
Literature: oryza Field: abstract Doc ID: pub19141708 Accession (PMID): 19141708
Abstract: Rice ( Oryza sativa ) forms adventitious root primordia at stem nodes during normal development . Root emergence is preceded by ethylene-induced , H ( 2 ) O ( 2 ) -mediated local death of epidermal cells . Exogenous H ( 2 ) O ( 2 ) or enhancement of endogenous H ( 2 ) O ( 2 ) promoted epidermal cell death in a dose-dependent manner . Inhibition of NADPH oxidase lowered ethylene-induced cell death rates . Inhibition of ethylene perception by 1-methylcyclopropene did not abolish H ( 2 ) O ( 2 ) -induced cell death , indicating that H ( 2 ) O ( 2 ) acts downstream of ethylene . Microarray studies of epidermal cells that undergo cell death identified 61 genes coregulated by the ethylene-releasing compound ethephon and by H ( 2 ) O ( 2 ) , supporting a joint signaling pathway . Regulation of the ethylene biosynthetic genes 1-Aminocyclopropane-1-Carboxylate Oxidase1 and Ethylene Overproducer-Like1 and downregulation of Metallothionein2b ( MT2b ) , which encodes a reactive oxygen scavenger , indicated mutual enhancement of ethylene and H ( 2 ) O ( 2 ) signaling . Analysis of MT2b knockdown mutants showed that cell death rates were inversely related to MT2b transcript abundance . Epidermal cells above adventitious roots have a morphological and molecular identity distinct from other epidermal cells . Pro-death signals regulated several transcription factor genes with a proposed function in cell type specification . It is hypothesized that induction of cell death is dependent on epidermal cell identity .
Matching Sentences:
[ Sen. 8, subscore: 2.00 ]: Analysis of MT2b knockdown mutants showed that cell death rates were inversely related to MT2b transcript abundance .
[ Sen. 7, subscore: 1.00 ]: Regulation of the ethylene biosynthetic genes 1-Aminocyclopropane-1-Carboxylate Oxidase1 and Ethylene Overproducer-Like1 and downregulation of Metallothionein2b ( MT2b ) , which encodes a reactive oxygen scavenger , indicated mutual enhancement of ethylene and H ( 2 ) O ( 2 ) signaling .
Supplemental links/files: reference in endnote online text related articles pubmed citation
Score: 2.00
Title: Aerenchyma formation in the rice stem and its promotion by H2O2 .
Author: Steffens B Geske T Sauter M
Journal: New Phytol Citation: V : 190 P : 369-78 Year: 2011 Type: MEDLINE
Literature: oryza Field: abstract Doc ID: pub21039565 Accession (PMID): 21039565
Abstract: * Gas spaces ( aerenchyma ) form as an adaptation to submergence to facilitate gas exchange . In rice ( Oryza sativa ) , aerenchyma develop by cell death and lysis , which are poorly understood at the cellular level . * Aerenchyma formation was studied in rice stems by light microscopy . It was analyzed in response to submergence , ethylene and hydrogen peroxide ( H ( 2 ) O ( 2 ) ) treatment , and in the MT2b : : Tos17 mutant . O ( 2 ) . ( - ) was detected with nitroblue tetrazolium and an epinephrine assay . H ( 2 ) O ( 2 ) was detected with 3 , 3-diaminobenzidine . * Aerenchyma develop constitutively in all internodes of the deep-water rice variety Pin Gaew 56 , but are absent from the nodes . Constitutive aerenchyma formation was also observed in two lowland rice varieties , albeit to a lesser degree . A larger number of aerenchyma are present in older internodes , and at the top of each internode , revealing developmental gradients . Submergence or treatment with the ethylene-releasing compound ethephon promoted aerenchyma formation in all genotypes analyzed . Pre-aerenchymal cells contain less starch , no chloroplasts , thinner cell walls and produce elevated levels of O ( 2 ) . ( - ) and H ( 2 ) O ( 2 ) compared with other parenchymal cells . Ethephon promotes O ( 2 ) . ( - ) formation and H ( 2 ) O ( 2 ) promotes aerenchyma formation in a dose-dependent manner . Further-more , genetic downregulation of the H ( 2 ) O ( 2 ) scavenger MT2b enhances aerenchyma formation . * Aerenchyma formation is mediated by reactive oxygen species .
Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: It was analyzed in response to submergence , ethylene and hydrogen peroxide ( H ( 2 ) O ( 2 ) ) treatment , and in the MT2b : : Tos17 mutant .
[ Sen. 13, subscore: 1.00 ]: Further-more , genetic downregulation of the H ( 2 ) O ( 2 ) scavenger MT2b enhances aerenchyma formation .
Supplemental links/files: reference in endnote online text related articles pubmed citation
Goto:

© Textpresso Sat Apr 27 10:44:33 2024 .